Cluster: CGMR070956_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR070956
- CGC Family ID: CGCFAM_08615
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_464986 | k141_464986_32 | 37299 | 38378 | - | GH5_38 |
| sulfatase | k141_464986 | k141_464986_33 | 38631 | 39935 | + | S1_2 |
| NULL(UNKNOWN) | k141_464986 | k141_464986_34 | 40006 | 41355 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_464986 | k141_464986_35 | 41558 | 43063 | + | 2.A.102.4.10 |
| TF | k141_464986 | k141_464986_36 | 43551 | 44405 | + | HTH_AraC |
| TC | k141_464986 | k141_464986_37 | 44588 | 45568 | + | 8.A.5.1.6 |
| CAZyme | k141_464986 | k141_464986_38 | 45583 | 46818 | + | GH76 |
Gene ID: k141_464986_32
Type: CAZyme
Location: 37299 - 38378 (-)
Type: CAZyme
Location: 37299 - 38378 (-)
Gene ID: k141_464986_33
Type: sulfatase
Location: 38631 - 39935 (+)
Type: sulfatase
Location: 38631 - 39935 (+)
Gene ID: k141_464986_34
Type:
Location: 40006 - 41355 (-)
Type:
Location: 40006 - 41355 (-)
Gene ID: k141_464986_35
Type: TC
Location: 41558 - 43063 (+)
Type: TC
Location: 41558 - 43063 (+)
Gene ID: k141_464986_36
Type: TF
Location: 43551 - 44405 (+)
Type: TF
Location: 43551 - 44405 (+)
Gene ID: k141_464986_37
Type: TC
Location: 44588 - 45568 (+)
Type: TC
Location: 44588 - 45568 (+)
Gene ID: k141_464986_38
Type: CAZyme
Location: 45583 - 46818 (+)
Type: CAZyme
Location: 45583 - 46818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017531305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.