dbCAN Logo

Cluster: CGMR070887_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_21503 k141_21503_19 17480 19405 + 9.B.18.2.1
pfam k141_21503 k141_21503_20 19532 20254 + Poly_export
TC k141_21503 k141_21503_21 20295 22655 + 8.A.3.3.4
pfam k141_21503 k141_21503_22 22680 23969 + Polysacc_synt | Polysacc_synt_3
pfam k141_21503 k141_21503_23 24008 25087 + EpsG
CAZyme k141_21503 k141_21503_24 25084 25911 + GT2
pfam k141_21503 k141_21503_25 25955 27019 + Beta_helix
CAZyme k141_21503 k141_21503_26 27016 28077 + GT4
TC k141_21503 k141_21503_27 28121 28810 + 9.B.18.1.2
Gene ID: k141_21503_19
Type: TC
Location: 17480 - 19405 (+)
Gene ID: k141_21503_20
Type: pfam
Location: 19532 - 20254 (+)
Gene ID: k141_21503_21
Type: TC
Location: 20295 - 22655 (+)
Gene ID: k141_21503_22
Type: pfam
Location: 22680 - 23969 (+)
Gene ID: k141_21503_23
Type: pfam
Location: 24008 - 25087 (+)
Gene ID: k141_21503_24
Type: CAZyme
Location: 25084 - 25911 (+)
Gene ID: k141_21503_25
Type: pfam
Location: 25955 - 27019 (+)
Gene ID: k141_21503_26
Type: CAZyme
Location: 27016 - 28077 (+)
Gene ID: k141_21503_27
Type: TC
Location: 28121 - 28810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List