Cluster: CGMR070866_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR070866
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_201206 | k141_201206_9 | 6995 | 7600 | + | AA6 |
| pfam | k141_201206 | k141_201206_10 | 7593 | 8015 | + | DUF2069 |
| STP | k141_201206 | k141_201206_11 | 8097 | 9041 | - | Pyr_redox_2 |
| TC | k141_201206 | k141_201206_12 | 9229 | 9960 | + | 2.A.121.1.1 |
| pfam | k141_201206 | k141_201206_13 | 10012 | 10893 | - | Dyp_perox_C |
| pfam | k141_201206 | k141_201206_14 | 10979 | 11620 | + | Lactamase_B |
| TC | k141_201206 | k141_201206_15 | 11702 | 12385 | + | 9.B.186.1.1 |
Gene ID: k141_201206_9
Type: CAZyme
Location: 6995 - 7600 (+)
Type: CAZyme
Location: 6995 - 7600 (+)
Gene ID: k141_201206_10
Type: pfam
Location: 7593 - 8015 (+)
Type: pfam
Location: 7593 - 8015 (+)
Gene ID: k141_201206_11
Type: STP
Location: 8097 - 9041 (-)
Type: STP
Location: 8097 - 9041 (-)
Gene ID: k141_201206_12
Type: TC
Location: 9229 - 9960 (+)
Type: TC
Location: 9229 - 9960 (+)
Gene ID: k141_201206_13
Type: pfam
Location: 10012 - 10893 (-)
Type: pfam
Location: 10012 - 10893 (-)
Gene ID: k141_201206_14
Type: pfam
Location: 10979 - 11620 (+)
Type: pfam
Location: 10979 - 11620 (+)
Gene ID: k141_201206_15
Type: TC
Location: 11702 - 12385 (+)
Type: TC
Location: 11702 - 12385 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Species
Thiopseudomonas sp012719655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.