Cluster: CGMR070864_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR070864
- CGC Family ID: CGCFAM_00043
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_152934 | k141_152934_1 | 1 | 1344 | + | 1.B.14.6.1 |
| TC | k141_152934 | k141_152934_2 | 1358 | 2836 | + | 8.A.46.1.3 |
| pfam | k141_152934 | k141_152934_3 | 2849 | 4342 | + | SusE | SusF_SusE | SusF_SusE |
| CAZyme | k141_152934 | k141_152934_4 | 4372 | 6129 | + | GH66 |
| CAZyme | k141_152934 | k141_152934_5 | 6173 | 8656 | + | GH31 |
Gene ID: k141_152934_1
Type: TC
Location: 1 - 1344 (+)
Type: TC
Location: 1 - 1344 (+)
Gene ID: k141_152934_2
Type: TC
Location: 1358 - 2836 (+)
Type: TC
Location: 1358 - 2836 (+)
Gene ID: k141_152934_3
Type: pfam
Location: 2849 - 4342 (+)
Type: pfam
Location: 2849 - 4342 (+)
Gene ID: k141_152934_4
Type: CAZyme
Location: 4372 - 6129 (+)
Type: CAZyme
Location: 4372 - 6129 (+)
Gene ID: k141_152934_5
Type: CAZyme
Location: 6173 - 8656 (+)
Type: CAZyme
Location: 6173 - 8656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Gelidibacter
Species
Gelidibacter japonicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.