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Cluster: CGMR070864_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7240 k141_7240_3 761 1636 + 3.A.1.148.3
TC k141_7240 k141_7240_4 1639 5244 + 3.A.1.145.3
TF k141_7240 k141_7240_5 5324 6073 - HTH_DeoR
TC k141_7240 k141_7240_6 7156 10347 + 1.B.14.6.13
TC k141_7240 k141_7240_7 10360 11847 + 8.A.46.2.1
CAZyme k141_7240 k141_7240_8 11928 13145 + GH171
TC k141_7240 k141_7240_9 13248 14717 + 2.A.21.5.5
STP k141_7240 k141_7240_10 14741 15562 + SIS
CAZyme k141_7240 k141_7240_11 15559 17250 + GH3
CAZyme k141_7240 k141_7240_12 17283 18752 + GH18
CAZyme k141_7240 k141_7240_13 18857 20074 + GH171
CAZyme k141_7240 k141_7240_14 20207 22726 + GH9
Gene ID: k141_7240_3
Type: TC
Location: 761 - 1636 (+)
Gene ID: k141_7240_4
Type: TC
Location: 1639 - 5244 (+)
Gene ID: k141_7240_5
Type: TF
Location: 5324 - 6073 (-)
Gene ID: k141_7240_6
Type: TC
Location: 7156 - 10347 (+)
Gene ID: k141_7240_7
Type: TC
Location: 10360 - 11847 (+)
Gene ID: k141_7240_8
Type: CAZyme
Location: 11928 - 13145 (+)
Gene ID: k141_7240_9
Type: TC
Location: 13248 - 14717 (+)
Gene ID: k141_7240_10
Type: STP
Location: 14741 - 15562 (+)
Gene ID: k141_7240_11
Type: CAZyme
Location: 15559 - 17250 (+)
Gene ID: k141_7240_12
Type: CAZyme
Location: 17283 - 18752 (+)
Gene ID: k141_7240_13
Type: CAZyme
Location: 18857 - 20074 (+)
Gene ID: k141_7240_14
Type: CAZyme
Location: 20207 - 22726 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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