dbCAN Logo

Cluster: CGMR070006_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1811772 k141_1811772_11 15032 16189 + 4.F.1.1.8
TC k141_1811772 k141_1811772_12 16192 17373 + 2.A.1.46.5
pfam k141_1811772 k141_1811772_13 17465 18178 - RNase_HII
pfam k141_1811772 k141_1811772_14 18178 18771 - Formyl_trans_N
CAZyme k141_1811772 k141_1811772_15 18929 22081 + GH116
NULL(UNKNOWN) k141_1811772 k141_1811772_16 22250 22618 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_1811772 k141_1811772_17 22669 24081 - tRNA-synt_2b | HGTP_anticodon
TC k141_1811772 k141_1811772_18 24166 25161 + 1.A.34.1.3
TC k141_1811772 k141_1811772_19 25163 25768 - 2.A.76.1.5
Gene ID: k141_1811772_11
Type: TC
Location: 15032 - 16189 (+)
Gene ID: k141_1811772_12
Type: TC
Location: 16192 - 17373 (+)
Gene ID: k141_1811772_13
Type: pfam
Location: 17465 - 18178 (-)
Gene ID: k141_1811772_14
Type: pfam
Location: 18178 - 18771 (-)
Gene ID: k141_1811772_15
Type: CAZyme
Location: 18929 - 22081 (+)
Gene ID: k141_1811772_16
Type:
Location: 22250 - 22618 (+)
Gene ID: k141_1811772_17
Type: pfam
Location: 22669 - 24081 (-)
Gene ID: k141_1811772_18
Type: TC
Location: 24166 - 25161 (+)
Gene ID: k141_1811772_19
Type: TC
Location: 25163 - 25768 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List