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Cluster: CGMR070006_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_486168 k141_486168_21 19422 21545 + 8.A.3.3.2
TC k141_486168 k141_486168_22 21556 22677 + 1.B.18.3.8
pfam k141_486168 k141_486168_23 22680 24050 + NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
pfam k141_486168 k141_486168_24 24119 24952 - Mg_trans_NIPA
CAZyme k141_486168 k141_486168_25 24961 27198 - GH23
TC k141_486168 k141_486168_26 27216 29021 - 8.A.7.1.1
TC k141_486168 k141_486168_27 28993 29265 - 8.A.8.1.5
Gene ID: k141_486168_21
Type: TC
Location: 19422 - 21545 (+)
Gene ID: k141_486168_22
Type: TC
Location: 21556 - 22677 (+)
Gene ID: k141_486168_23
Type: pfam
Location: 22680 - 24050 (+)
Gene ID: k141_486168_24
Type: pfam
Location: 24119 - 24952 (-)
Gene ID: k141_486168_25
Type: CAZyme
Location: 24961 - 27198 (-)
Gene ID: k141_486168_26
Type: TC
Location: 27216 - 29021 (-)
Gene ID: k141_486168_27
Type: TC
Location: 28993 - 29265 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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