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Cluster: CGMR070006_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1948275 k141_1948275_20 20056 21192 + GT2
TC k141_1948275 k141_1948275_21 21203 23662 + 3.A.7.7.1
CAZyme k141_1948275 k141_1948275_22 23699 24871 + GH3
TC k141_1948275 k141_1948275_23 25221 26633 - 2.A.25.1.5
TC k141_1948275 k141_1948275_24 26876 27985 + 1.B.23.3.4
pfam k141_1948275 k141_1948275_25 28093 28977 - MTHFR
NULL(UNKNOWN) k141_1948275 k141_1948275_26 29124 30173 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_1948275 k141_1948275_27 30330 31736 + GT5
TC k141_1948275 k141_1948275_28 31802 35248 - 2.A.1.42.2
Gene ID: k141_1948275_20
Type: CAZyme
Location: 20056 - 21192 (+)
Gene ID: k141_1948275_21
Type: TC
Location: 21203 - 23662 (+)
Gene ID: k141_1948275_22
Type: CAZyme
Location: 23699 - 24871 (+)
Gene ID: k141_1948275_23
Type: TC
Location: 25221 - 26633 (-)
Gene ID: k141_1948275_24
Type: TC
Location: 26876 - 27985 (+)
Gene ID: k141_1948275_25
Type: pfam
Location: 28093 - 28977 (-)
Gene ID: k141_1948275_26
Type:
Location: 29124 - 30173 (-)
Gene ID: k141_1948275_27
Type: CAZyme
Location: 30330 - 31736 (+)
Gene ID: k141_1948275_28
Type: TC
Location: 31802 - 35248 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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