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Cluster: CGMR069942_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19319 k141_19319_25 23749 25701 + 3.A.2.2.2
TC k141_19319 k141_19319_26 25717 26241 + 3.A.2.2.2
pfam k141_19319 k141_19319_27 26261 26950 + vATP-synt_E
pfam k141_19319 k141_19319_28 26968 27966 + vATP-synt_AC39
TC k141_19319 k141_19319_29 27982 28290 + 3.A.2.2.2
TC k141_19319 k141_19319_30 28538 30310 + 3.A.2.2.2
TC k141_19319 k141_19319_31 30307 31683 + 3.A.2.2.2
TC k141_19319 k141_19319_32 31696 32385 + 3.A.2.2.2
pfam k141_19319 k141_19319_33 32808 33656 - CarboxypepD_reg | CarboxypepD_reg | CarboxypepD_reg | SpaA | SpaA
pfam k141_19319 k141_19319_34 33794 34513 - Glucosamine_iso
CAZyme k141_19319 k141_19319_35 34538 35653 - CE9
Gene ID: k141_19319_25
Type: TC
Location: 23749 - 25701 (+)
Gene ID: k141_19319_26
Type: TC
Location: 25717 - 26241 (+)
Gene ID: k141_19319_27
Type: pfam
Location: 26261 - 26950 (+)
Gene ID: k141_19319_28
Type: pfam
Location: 26968 - 27966 (+)
Gene ID: k141_19319_29
Type: TC
Location: 27982 - 28290 (+)
Gene ID: k141_19319_30
Type: TC
Location: 28538 - 30310 (+)
Gene ID: k141_19319_31
Type: TC
Location: 30307 - 31683 (+)
Gene ID: k141_19319_32
Type: TC
Location: 31696 - 32385 (+)
Gene ID: k141_19319_33
Type: pfam
Location: 32808 - 33656 (-)
Gene ID: k141_19319_34
Type: pfam
Location: 33794 - 34513 (-)
Gene ID: k141_19319_35
Type: CAZyme
Location: 34538 - 35653 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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