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Cluster: CGMR069942_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_118237 k141_118237_104 131367 132962 + 2.A.35.2.1
CAZyme k141_118237 k141_118237_105 133088 135574 + GH31_15
pfam k141_118237 k141_118237_106 135625 136311 - Lyx_isomer
CAZyme k141_118237 k141_118237_107 136437 138377 - GH42
NULL(UNKNOWN) k141_118237 k141_118237_108 138635 139582 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_118237 k141_118237_109 139601 141202 - 2.A.50.2.1
NULL(UNKNOWN) k141_118237 k141_118237_110 141204 141434 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_118237 k141_118237_111 141444 142628 - Orn_DAP_Arg_deC | Ala_racemase_N | Orn_Arg_deC_N
TC k141_118237 k141_118237_112 142621 144096 - 4.C.1.1.7
Gene ID: k141_118237_104
Type: TC
Location: 131367 - 132962 (+)
Gene ID: k141_118237_105
Type: CAZyme
Location: 133088 - 135574 (+)
Gene ID: k141_118237_106
Type: pfam
Location: 135625 - 136311 (-)
Gene ID: k141_118237_107
Type: CAZyme
Location: 136437 - 138377 (-)
Gene ID: k141_118237_108
Type:
Location: 138635 - 139582 (-)
Gene ID: k141_118237_109
Type: TC
Location: 139601 - 141202 (-)
Gene ID: k141_118237_110
Type:
Location: 141204 - 141434 (-)
Gene ID: k141_118237_111
Type: pfam
Location: 141444 - 142628 (-)
Gene ID: k141_118237_112
Type: TC
Location: 142621 - 144096 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_118237_105 vegan > omnivore 2.53498 0.02217
k141_118237_109 vegan > omnivore 4.12878 0.02217

🧭 Explore Read Mapping of CGC

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