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Cluster: CGMR069942_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_229879 k141_229879_22 19914 21248 + 9.A.40.2.1
TF k141_229879 k141_229879_23 22285 22830 - PadR
TC k141_229879 k141_229879_24 23017 24288 + 2.A.115.2.14
TC k141_229879 k141_229879_25 24345 26231 - 3.A.1.135.5
TC k141_229879 k141_229879_26 26249 27058 - 3.A.1.135.8
NULL(UNKNOWN) k141_229879 k141_229879_27 27459 27809 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_229879 k141_229879_28 27970 28929 - PfkB
CAZyme k141_229879 k141_229879_29 28946 30424 - GH32
STP k141_229879 k141_229879_30 30461 32164 - SBP_bac_1
TC k141_229879 k141_229879_31 32181 33068 - 3.A.1.1.29
TC k141_229879 k141_229879_32 33083 34021 - 3.A.1.1.10
Gene ID: k141_229879_22
Type: TC
Location: 19914 - 21248 (+)
Gene ID: k141_229879_23
Type: TF
Location: 22285 - 22830 (-)
Gene ID: k141_229879_24
Type: TC
Location: 23017 - 24288 (+)
Gene ID: k141_229879_25
Type: TC
Location: 24345 - 26231 (-)
Gene ID: k141_229879_26
Type: TC
Location: 26249 - 27058 (-)
Gene ID: k141_229879_27
Type:
Location: 27459 - 27809 (+)
Gene ID: k141_229879_28
Type: STP
Location: 27970 - 28929 (-)
Gene ID: k141_229879_29
Type: CAZyme
Location: 28946 - 30424 (-)
Gene ID: k141_229879_30
Type: STP
Location: 30461 - 32164 (-)
Gene ID: k141_229879_31
Type: TC
Location: 32181 - 33068 (-)
Gene ID: k141_229879_32
Type: TC
Location: 33083 - 34021 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_229879_23 vegan > omnivore 14.61001 0.02217
k141_229879_32 vegan > omnivore 1.41218 0.02217

🧭 Explore Read Mapping of CGC

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