Cluster: CGMR069942_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR069942
- CGC Family ID: CGCFAM_04227
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_171159 | k141_171159_77 | 79889 | 82075 | + | GH13_4 |
| TF | k141_171159 | k141_171159_78 | 82112 | 83098 | + | LacI |
| peptidase | k141_171159 | k141_171159_79 | 83210 | 84145 | + | S09.UPW |
| CAZyme | k141_171159 | k141_171159_80 | 84243 | 85685 | + | GH77 |
| TF | k141_171159 | k141_171159_81 | 85714 | 86379 | - | HTH_3 |
| TC | k141_171159 | k141_171159_82 | 86497 | 88671 | - | 3.A.16.1.2 |
Gene ID: k141_171159_77
Type: CAZyme
Location: 79889 - 82075 (+)
Type: CAZyme
Location: 79889 - 82075 (+)
Gene ID: k141_171159_78
Type: TF
Location: 82112 - 83098 (+)
Type: TF
Location: 82112 - 83098 (+)
Gene ID: k141_171159_79
Type: peptidase
Location: 83210 - 84145 (+)
Type: peptidase
Location: 83210 - 84145 (+)
Gene ID: k141_171159_80
Type: CAZyme
Location: 84243 - 85685 (+)
Type: CAZyme
Location: 84243 - 85685 (+)
Gene ID: k141_171159_81
Type: TF
Location: 85714 - 86379 (-)
Type: TF
Location: 85714 - 86379 (-)
Gene ID: k141_171159_82
Type: TC
Location: 86497 - 88671 (-)
Type: TC
Location: 86497 - 88671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp000177015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.