Cluster: CGMR069911_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_01751
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23941 | k141_23941_16 | 13412 | 14833 | - | GH23 |
| pfam | k141_23941 | k141_23941_17 | 15070 | 15876 | + | TatD_DNase |
| TC | k141_23941 | k141_23941_18 | 15973 | 17442 | + | 1.B.52.2.1 |
Gene ID: k141_23941_16
Type: CAZyme
Location: 13412 - 14833 (-)
Type: CAZyme
Location: 13412 - 14833 (-)
Gene ID: k141_23941_17
Type: pfam
Location: 15070 - 15876 (+)
Type: pfam
Location: 15070 - 15876 (+)
Gene ID: k141_23941_18
Type: TC
Location: 15973 - 17442 (+)
Type: TC
Location: 15973 - 17442 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.