Cluster: CGMR069911_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_08921
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_772 | k141_772_2 | 310 | 978 | - | 3.A.1.125.2 |
| NULL(UNKNOWN) | k141_772 | k141_772_3 | 1263 | 1934 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_772 | k141_772_4 | 2116 | 3771 | + | GT83 |
| CAZyme | k141_772 | k141_772_5 | 3800 | 5317 | + | GT83 |
Gene ID: k141_772_2
Type: TC
Location: 310 - 978 (-)
Type: TC
Location: 310 - 978 (-)
Gene ID: k141_772_3
Type:
Location: 1263 - 1934 (+)
Type:
Location: 1263 - 1934 (+)
Gene ID: k141_772_4
Type: CAZyme
Location: 2116 - 3771 (+)
Type: CAZyme
Location: 2116 - 3771 (+)
Gene ID: k141_772_5
Type: CAZyme
Location: 3800 - 5317 (+)
Type: CAZyme
Location: 3800 - 5317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.