Cluster: CGMR069911_CGC35
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10733 | k141_10733_5 | 4810 | 5892 | + | 9.B.146.1.6 |
| pfam | k141_10733 | k141_10733_6 | 5899 | 7245 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_10733 | k141_10733_7 | 7242 | 8465 | + | 2.A.103.1.1 |
| CAZyme | k141_10733 | k141_10733_8 | 8455 | 9525 | + | GT28 |
Gene ID: k141_10733_5
Type: TC
Location: 4810 - 5892 (+)
Type: TC
Location: 4810 - 5892 (+)
Gene ID: k141_10733_6
Type: pfam
Location: 5899 - 7245 (+)
Type: pfam
Location: 5899 - 7245 (+)
Gene ID: k141_10733_7
Type: TC
Location: 7242 - 8465 (+)
Type: TC
Location: 7242 - 8465 (+)
Gene ID: k141_10733_8
Type: CAZyme
Location: 8455 - 9525 (+)
Type: CAZyme
Location: 8455 - 9525 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.