Cluster: CGMR069911_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_05745
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_15223 | k141_15223_19 | 18569 | 20176 | - | GT83 |
| TC | k141_15223 | k141_15223_20 | 20264 | 21229 | - | 2.A.59.2.1 |
| NULL(UNKNOWN) | k141_15223 | k141_15223_21 | 21388 | 21801 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_15223 | k141_15223_22 | 21975 | 23366 | - | 2.A.3.1.4 |
| TC | k141_15223 | k141_15223_23 | 23921 | 24538 | + | 3.A.1.3.23 |
Gene ID: k141_15223_19
Type: CAZyme
Location: 18569 - 20176 (-)
Type: CAZyme
Location: 18569 - 20176 (-)
Gene ID: k141_15223_20
Type: TC
Location: 20264 - 21229 (-)
Type: TC
Location: 20264 - 21229 (-)
Gene ID: k141_15223_21
Type:
Location: 21388 - 21801 (+)
Type:
Location: 21388 - 21801 (+)
Gene ID: k141_15223_22
Type: TC
Location: 21975 - 23366 (-)
Type: TC
Location: 21975 - 23366 (-)
Gene ID: k141_15223_23
Type: TC
Location: 23921 - 24538 (+)
Type: TC
Location: 23921 - 24538 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.