Cluster: CGMR069911_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_00065
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50523 | k141_50523_1 | 165 | 2072 | - | 3.A.1.106.1 |
| TC | k141_50523 | k141_50523_2 | 2093 | 3970 | + | 9.B.67.6.3 |
| CAZyme | k141_50523 | k141_50523_3 | 4094 | 4975 | - | GT2 |
| CAZyme | k141_50523 | k141_50523_4 | 4972 | 5472 | - | GT4 |
Gene ID: k141_50523_1
Type: TC
Location: 165 - 2072 (-)
Type: TC
Location: 165 - 2072 (-)
Gene ID: k141_50523_2
Type: TC
Location: 2093 - 3970 (+)
Type: TC
Location: 2093 - 3970 (+)
Gene ID: k141_50523_3
Type: CAZyme
Location: 4094 - 4975 (-)
Type: CAZyme
Location: 4094 - 4975 (-)
Gene ID: k141_50523_4
Type: CAZyme
Location: 4972 - 5472 (-)
Type: CAZyme
Location: 4972 - 5472 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.