Cluster: CGMR069911_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_03814
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12536 | k141_12536_1 | 1 | 2226 | - | 2.A.6.2.39 |
| TC | k141_12536 | k141_12536_2 | 2223 | 5324 | - | 2.A.6.2.39 |
| TC | k141_12536 | k141_12536_3 | 5321 | 6619 | - | 2.A.6.2.39 |
| pfam | k141_12536 | k141_12536_4 | 6851 | 7351 | - | AhpC-TSA | Redoxin |
| CAZyme | k141_12536 | k141_12536_5 | 7510 | 8799 | + | GT4 |
Gene ID: k141_12536_1
Type: TC
Location: 1 - 2226 (-)
Type: TC
Location: 1 - 2226 (-)
Gene ID: k141_12536_2
Type: TC
Location: 2223 - 5324 (-)
Type: TC
Location: 2223 - 5324 (-)
Gene ID: k141_12536_3
Type: TC
Location: 5321 - 6619 (-)
Type: TC
Location: 5321 - 6619 (-)
Gene ID: k141_12536_4
Type: pfam
Location: 6851 - 7351 (-)
Type: pfam
Location: 6851 - 7351 (-)
Gene ID: k141_12536_5
Type: CAZyme
Location: 7510 - 8799 (+)
Type: CAZyme
Location: 7510 - 8799 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.