Cluster: CGMR069911_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_01364
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31014 | k141_31014_6 | 5197 | 7767 | + | GT2 |
| TC | k141_31014 | k141_31014_7 | 7955 | 8755 | + | 3.A.1.3.3 |
| TC | k141_31014 | k141_31014_8 | 8972 | 9772 | + | 3.A.1.3.27 |
| TC | k141_31014 | k141_31014_9 | 9903 | 10862 | + | 3.A.1.3.17 |
| TC | k141_31014 | k141_31014_10 | 10855 | 11589 | + | 3.A.1.3.22 |
Gene ID: k141_31014_6
Type: CAZyme
Location: 5197 - 7767 (+)
Type: CAZyme
Location: 5197 - 7767 (+)
Gene ID: k141_31014_7
Type: TC
Location: 7955 - 8755 (+)
Type: TC
Location: 7955 - 8755 (+)
Gene ID: k141_31014_8
Type: TC
Location: 8972 - 9772 (+)
Type: TC
Location: 8972 - 9772 (+)
Gene ID: k141_31014_9
Type: TC
Location: 9903 - 10862 (+)
Type: TC
Location: 9903 - 10862 (+)
Gene ID: k141_31014_10
Type: TC
Location: 10855 - 11589 (+)
Type: TC
Location: 10855 - 11589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.