Cluster: CGMR069911_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_00529
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_27050 | k141_27050_1 | 3 | 2822 | + | GH13_16 |
| CAZyme | k141_27050 | k141_27050_2 | 2819 | 5065 | + | CBM48 | GH13_9 |
| TC | k141_27050 | k141_27050_3 | 5146 | 6090 | + | 9.B.34.1.4 |
Gene ID: k141_27050_1
Type: CAZyme
Location: 3 - 2822 (+)
Type: CAZyme
Location: 3 - 2822 (+)
Gene ID: k141_27050_2
Type: CAZyme
Location: 2819 - 5065 (+)
Type: CAZyme
Location: 2819 - 5065 (+)
Gene ID: k141_27050_3
Type: TC
Location: 5146 - 6090 (+)
Type: TC
Location: 5146 - 6090 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.