Cluster: CGMR069911_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_08919
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_41890 | k141_41890_1 | 344 | 2002 | - | 2.A.21.7.2 |
| TC | k141_41890 | k141_41890_2 | 1999 | 2310 | - | 9.B.136.1.1 |
| TC | k141_41890 | k141_41890_3 | 2543 | 3394 | - | 3.A.1.12.12 |
| CAZyme | k141_41890 | k141_41890_4 | 3727 | 5280 | + | GH17 |
Gene ID: k141_41890_1
Type: TC
Location: 344 - 2002 (-)
Type: TC
Location: 344 - 2002 (-)
Gene ID: k141_41890_2
Type: TC
Location: 1999 - 2310 (-)
Type: TC
Location: 1999 - 2310 (-)
Gene ID: k141_41890_3
Type: TC
Location: 2543 - 3394 (-)
Type: TC
Location: 2543 - 3394 (-)
Gene ID: k141_41890_4
Type: CAZyme
Location: 3727 - 5280 (+)
Type: CAZyme
Location: 3727 - 5280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.