Cluster: CGMR069911_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_05744
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_45241 | k141_45241_1 | 1 | 2508 | - | 4.A.1.1.15 |
| TC | k141_45241 | k141_45241_2 | 2558 | 3778 | - | 1.B.3.1.1 |
| CAZyme | k141_45241 | k141_45241_3 | 3947 | 5593 | - | GH13_29 |
| TC | k141_45241 | k141_45241_4 | 5715 | 6554 | - | 4.A.1.2.8 |
Gene ID: k141_45241_1
Type: TC
Location: 1 - 2508 (-)
Type: TC
Location: 1 - 2508 (-)
Gene ID: k141_45241_2
Type: TC
Location: 2558 - 3778 (-)
Type: TC
Location: 2558 - 3778 (-)
Gene ID: k141_45241_3
Type: CAZyme
Location: 3947 - 5593 (-)
Type: CAZyme
Location: 3947 - 5593 (-)
Gene ID: k141_45241_4
Type: TC
Location: 5715 - 6554 (-)
Type: TC
Location: 5715 - 6554 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.