Cluster: CGMR069911_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_00359
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16352 | k141_16352_3 | 1681 | 3282 | - | 3.A.1.5.21 |
| TC | k141_16352 | k141_16352_4 | 3284 | 4303 | - | 3.A.1.5.21 |
| TC | k141_16352 | k141_16352_5 | 4305 | 5378 | - | 3.A.1.5.21 |
| TC | k141_16352 | k141_16352_6 | 5379 | 7217 | - | 3.A.1.5.24 |
| TC | k141_16352 | k141_16352_7 | 7214 | 9043 | - | 3.A.1.5.21 |
| CAZyme | k141_16352 | k141_16352_8 | 9280 | 10680 | - | GH23 |
Gene ID: k141_16352_3
Type: TC
Location: 1681 - 3282 (-)
Type: TC
Location: 1681 - 3282 (-)
Gene ID: k141_16352_4
Type: TC
Location: 3284 - 4303 (-)
Type: TC
Location: 3284 - 4303 (-)
Gene ID: k141_16352_5
Type: TC
Location: 4305 - 5378 (-)
Type: TC
Location: 4305 - 5378 (-)
Gene ID: k141_16352_6
Type: TC
Location: 5379 - 7217 (-)
Type: TC
Location: 5379 - 7217 (-)
Gene ID: k141_16352_7
Type: TC
Location: 7214 - 9043 (-)
Type: TC
Location: 7214 - 9043 (-)
Gene ID: k141_16352_8
Type: CAZyme
Location: 9280 - 10680 (-)
Type: CAZyme
Location: 9280 - 10680 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.