Cluster: CGMR069911_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR069911
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50617 | k141_50617_4 | 2537 | 3886 | + | 2.A.1.14.3 |
| pfam | k141_50617 | k141_50617_5 | 3906 | 5231 | + | MR_MLE_C |
| CAZyme | k141_50617 | k141_50617_6 | 5365 | 6429 | - | GH18 |
| CAZyme | k141_50617 | k141_50617_7 | 6470 | 7105 | - | AA10 |
Gene ID: k141_50617_4
Type: TC
Location: 2537 - 3886 (+)
Type: TC
Location: 2537 - 3886 (+)
Gene ID: k141_50617_5
Type: pfam
Location: 3906 - 5231 (+)
Type: pfam
Location: 3906 - 5231 (+)
Gene ID: k141_50617_6
Type: CAZyme
Location: 5365 - 6429 (-)
Type: CAZyme
Location: 5365 - 6429 (-)
Gene ID: k141_50617_7
Type: CAZyme
Location: 6470 - 7105 (-)
Type: CAZyme
Location: 6470 - 7105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.