Cluster: CGMR069911_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- CGC Family ID: CGCFAM_01454
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39969 | k141_39969_5 | 3639 | 4565 | - | CE4 |
| TC | k141_39969 | k141_39969_6 | 5005 | 5358 | + | 9.B.35.1.2 |
| pfam | k141_39969 | k141_39969_7 | 5522 | 10702 | + | ToxA_N | ToxA_N |
| pfam | k141_39969 | k141_39969_8 | 10677 | 11315 | - | LysE |
| TC | k141_39969 | k141_39969_9 | 11381 | 12727 | - | 2.A.40.7.6 |
Gene ID: k141_39969_5
Type: CAZyme
Location: 3639 - 4565 (-)
Type: CAZyme
Location: 3639 - 4565 (-)
Gene ID: k141_39969_6
Type: TC
Location: 5005 - 5358 (+)
Type: TC
Location: 5005 - 5358 (+)
Gene ID: k141_39969_7
Type: pfam
Location: 5522 - 10702 (+)
Type: pfam
Location: 5522 - 10702 (+)
Gene ID: k141_39969_8
Type: pfam
Location: 10677 - 11315 (-)
Type: pfam
Location: 10677 - 11315 (-)
Gene ID: k141_39969_9
Type: TC
Location: 11381 - 12727 (-)
Type: TC
Location: 11381 - 12727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.