Cluster: CGMR069911_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43481 | k141_43481_2 | 491 | 2047 | - | GT5 |
| pfam | k141_43481 | k141_43481_3 | 2503 | 3456 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| peptidase | k141_43481 | k141_43481_4 | 3482 | 4483 | - | S33.UPW |
| TC | k141_43481 | k141_43481_5 | 4540 | 4965 | - | 9.B.27.3.3 |
Gene ID: k141_43481_2
Type: CAZyme
Location: 491 - 2047 (-)
Type: CAZyme
Location: 491 - 2047 (-)
Gene ID: k141_43481_3
Type: pfam
Location: 2503 - 3456 (-)
Type: pfam
Location: 2503 - 3456 (-)
Gene ID: k141_43481_4
Type: peptidase
Location: 3482 - 4483 (-)
Type: peptidase
Location: 3482 - 4483 (-)
Gene ID: k141_43481_5
Type: TC
Location: 4540 - 4965 (-)
Type: TC
Location: 4540 - 4965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.