Cluster: CGMR069911_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39122 | k141_39122_1 | 1 | 1035 | - | GH68 |
| TF | k141_39122 | k141_39122_2 | 1249 | 2127 | - | HTH_1 |
| STP | k141_39122 | k141_39122_3 | 2283 | 2708 | + | Glyoxalase |
| TC | k141_39122 | k141_39122_4 | 2821 | 4077 | + | 2.A.23.1.1 |
Gene ID: k141_39122_1
Type: CAZyme
Location: 1 - 1035 (-)
Type: CAZyme
Location: 1 - 1035 (-)
Gene ID: k141_39122_2
Type: TF
Location: 1249 - 2127 (-)
Type: TF
Location: 1249 - 2127 (-)
Gene ID: k141_39122_3
Type: STP
Location: 2283 - 2708 (+)
Type: STP
Location: 2283 - 2708 (+)
Gene ID: k141_39122_4
Type: TC
Location: 2821 - 4077 (+)
Type: TC
Location: 2821 - 4077 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.