Cluster: CGMR069911_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR069911
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43556 | k141_43556_3 | 1287 | 2867 | - | GT83 |
| NULL(UNKNOWN) | k141_43556 | k141_43556_4 | 3061 | 5223 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_43556 | k141_43556_5 | 5220 | 5924 | + | DUF3142 |
| TC | k141_43556 | k141_43556_6 | 6057 | 8510 | - | 1.B.14.1.26 |
| STP | k141_43556 | k141_43556_7 | 8603 | 9553 | - | FecR |
| TF | k141_43556 | k141_43556_8 | 9550 | 10059 | - | 0039939 |
| TC | k141_43556 | k141_43556_9 | 10134 | 10751 | - | 3.A.1.105.4 |
Gene ID: k141_43556_3
Type: CAZyme
Location: 1287 - 2867 (-)
Type: CAZyme
Location: 1287 - 2867 (-)
Gene ID: k141_43556_4
Type:
Location: 3061 - 5223 (+)
Type:
Location: 3061 - 5223 (+)
Gene ID: k141_43556_5
Type: pfam
Location: 5220 - 5924 (+)
Type: pfam
Location: 5220 - 5924 (+)
Gene ID: k141_43556_6
Type: TC
Location: 6057 - 8510 (-)
Type: TC
Location: 6057 - 8510 (-)
Gene ID: k141_43556_7
Type: STP
Location: 8603 - 9553 (-)
Type: STP
Location: 8603 - 9553 (-)
Gene ID: k141_43556_8
Type: TF
Location: 9550 - 10059 (-)
Type: TF
Location: 9550 - 10059 (-)
Gene ID: k141_43556_9
Type: TC
Location: 10134 - 10751 (-)
Type: TC
Location: 10134 - 10751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.