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Cluster: CGMR069888_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9974 k141_9974_37 35032 36054 - GT28
TC k141_9974 k141_9974_38 36051 37211 - 2.A.103.1.1
pfam k141_9974 k141_9974_39 37303 38091 + Asp_Glu_race
pfam k141_9974 k141_9974_40 38160 38750 - VTT_dom
TC k141_9974 k141_9974_41 38907 39317 - 3.A.1.24.1
TC k141_9974 k141_9974_42 39341 39685 - 3.A.1.24.5
TC k141_9974 k141_9974_43 39761 40543 - 3.A.1.24.5
TC k141_9974 k141_9974_44 40802 41476 - 3.A.1.24.5
TC k141_9974 k141_9974_45 41476 42432 - 3.A.1.24.2
pfam k141_9974 k141_9974_46 42432 45056 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
peptidase k141_9974 k141_9974_47 45178 50301 - I39.UPW
CAZyme k141_9974 k141_9974_48 50303 52471 - GT51
pfam k141_9974 k141_9974_49 52537 54570 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
TC k141_9974 k141_9974_50 54624 55817 + 3.A.1.122.1
TC k141_9974 k141_9974_51 55818 57746 + 3.A.1.122.12
TC k141_9974 k141_9974_52 57748 59094 + 1.B.17.3.7
Gene ID: k141_9974_37
Type: CAZyme
Location: 35032 - 36054 (-)
Gene ID: k141_9974_38
Type: TC
Location: 36051 - 37211 (-)
Gene ID: k141_9974_39
Type: pfam
Location: 37303 - 38091 (+)
Gene ID: k141_9974_40
Type: pfam
Location: 38160 - 38750 (-)
Gene ID: k141_9974_41
Type: TC
Location: 38907 - 39317 (-)
Gene ID: k141_9974_42
Type: TC
Location: 39341 - 39685 (-)
Gene ID: k141_9974_43
Type: TC
Location: 39761 - 40543 (-)
Gene ID: k141_9974_44
Type: TC
Location: 40802 - 41476 (-)
Gene ID: k141_9974_45
Type: TC
Location: 41476 - 42432 (-)
Gene ID: k141_9974_46
Type: pfam
Location: 42432 - 45056 (-)
Gene ID: k141_9974_47
Type: peptidase
Location: 45178 - 50301 (-)
Gene ID: k141_9974_48
Type: CAZyme
Location: 50303 - 52471 (-)
Gene ID: k141_9974_49
Type: pfam
Location: 52537 - 54570 (+)
Gene ID: k141_9974_50
Type: TC
Location: 54624 - 55817 (+)
Gene ID: k141_9974_51
Type: TC
Location: 55818 - 57746 (+)
Gene ID: k141_9974_52
Type: TC
Location: 57748 - 59094 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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