Cluster: CGMR069888_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR069888
- CGC Family ID: CGCFAM_00076
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_9071 | k141_9071_55 | 51663 | 53444 | - | 9.B.18.2.1 |
| pfam | k141_9071 | k141_9071_56 | 53445 | 54536 | - | Aminotran_5 | DegT_DnrJ_EryC1 | Beta_elim_lyase |
| pfam | k141_9071 | k141_9071_57 | 54586 | 55176 | - | Hexapep | PglD_N |
| TC | k141_9071 | k141_9071_58 | 55163 | 55768 | - | 9.B.18.1.2 |
| CAZyme | k141_9071 | k141_9071_59 | 55761 | 56876 | - | GT4 |
| CAZyme | k141_9071 | k141_9071_60 | 56879 | 58978 | - | GT66 |
| CAZyme | k141_9071 | k141_9071_61 | 58971 | 60095 | - | GT4 |
| CAZyme | k141_9071 | k141_9071_62 | 60092 | 61135 | - | GT4 |
| CAZyme | k141_9071 | k141_9071_63 | 61132 | 62190 | - | GT4 |
| CAZyme | k141_9071 | k141_9071_64 | 62187 | 63119 | - | GT2 |
| CAZyme | k141_9071 | k141_9071_65 | 63120 | 63881 | - | GT25 |
Gene ID: k141_9071_55
Type: TC
Location: 51663 - 53444 (-)
Type: TC
Location: 51663 - 53444 (-)
Gene ID: k141_9071_56
Type: pfam
Location: 53445 - 54536 (-)
Type: pfam
Location: 53445 - 54536 (-)
Gene ID: k141_9071_57
Type: pfam
Location: 54586 - 55176 (-)
Type: pfam
Location: 54586 - 55176 (-)
Gene ID: k141_9071_58
Type: TC
Location: 55163 - 55768 (-)
Type: TC
Location: 55163 - 55768 (-)
Gene ID: k141_9071_59
Type: CAZyme
Location: 55761 - 56876 (-)
Type: CAZyme
Location: 55761 - 56876 (-)
Gene ID: k141_9071_60
Type: CAZyme
Location: 56879 - 58978 (-)
Type: CAZyme
Location: 56879 - 58978 (-)
Gene ID: k141_9071_61
Type: CAZyme
Location: 58971 - 60095 (-)
Type: CAZyme
Location: 58971 - 60095 (-)
Gene ID: k141_9071_62
Type: CAZyme
Location: 60092 - 61135 (-)
Type: CAZyme
Location: 60092 - 61135 (-)
Gene ID: k141_9071_63
Type: CAZyme
Location: 61132 - 62190 (-)
Type: CAZyme
Location: 61132 - 62190 (-)
Gene ID: k141_9071_64
Type: CAZyme
Location: 62187 - 63119 (-)
Type: CAZyme
Location: 62187 - 63119 (-)
Gene ID: k141_9071_65
Type: CAZyme
Location: 63120 - 63881 (-)
Type: CAZyme
Location: 63120 - 63881 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.