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Cluster: CGMR069507_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_319948 k141_319948_4 2264 3868 + 3.A.1.121.4
pfam k141_319948 k141_319948_5 3887 4495 + UPF0029 | DUF1949
pfam k141_319948 k141_319948_6 4497 4871 - Thioredoxin | Thioredoxin_2 | Thioredoxin_9
TC k141_319948 k141_319948_7 4991 6283 - 2.A.40.7.6
pfam k141_319948 k141_319948_8 6389 7423 + TsaD | HypF_C_2
TC k141_319948 k141_319948_9 7424 8053 - 9.B.31.1.1
pfam k141_319948 k141_319948_10 8167 8913 + SurE
CAZyme k141_319948 k141_319948_11 8910 9704 + CBM50
pfam k141_319948 k141_319948_12 9724 11034 + TRAM | tRNA_U5-meth_tr
pfam k141_319948 k141_319948_13 11011 12417 - Lyase_1 | ASL_C2
TC k141_319948 k141_319948_14 12510 13820 + 1.A.23.4.5
pfam k141_319948 k141_319948_15 13865 14203 + P-II
TC k141_319948 k141_319948_16 14198 15433 - 2.A.1.81.1
Gene ID: k141_319948_4
Type: TC
Location: 2264 - 3868 (+)
Gene ID: k141_319948_5
Type: pfam
Location: 3887 - 4495 (+)
Gene ID: k141_319948_6
Type: pfam
Location: 4497 - 4871 (-)
Gene ID: k141_319948_7
Type: TC
Location: 4991 - 6283 (-)
Gene ID: k141_319948_8
Type: pfam
Location: 6389 - 7423 (+)
Gene ID: k141_319948_9
Type: TC
Location: 7424 - 8053 (-)
Gene ID: k141_319948_10
Type: pfam
Location: 8167 - 8913 (+)
Gene ID: k141_319948_11
Type: CAZyme
Location: 8910 - 9704 (+)
Gene ID: k141_319948_12
Type: pfam
Location: 9724 - 11034 (+)
Gene ID: k141_319948_13
Type: pfam
Location: 11011 - 12417 (-)
Gene ID: k141_319948_14
Type: TC
Location: 12510 - 13820 (+)
Gene ID: k141_319948_15
Type: pfam
Location: 13865 - 14203 (+)
Gene ID: k141_319948_16
Type: TC
Location: 14198 - 15433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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