dbCAN Logo

Cluster: CGMR069458_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2683 k141_2683_13 16975 18297 + 2.A.13.1.3
pfam k141_2683 k141_2683_14 18496 22764 - RNA_pol_Rpb1_2 | RNA_pol_Rpb1_2 | RNA_pol_Rpb1_3 | RNA_pol_Rpb1_1 | RNA_pol_Rpb1_5 | RNA_pol_Rpb1_4
pfam k141_2683 k141_2683_15 22890 26918 - RNA_pol_Rpb2_6 | RNA_pol_Rpb2_7 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_1 | RNA_pol_Rpb2_3 | RNA_pol_Rpb2_45
TC k141_2683 k141_2683_16 27301 27990 - 1.C.82.1.1
pfam k141_2683 k141_2683_17 27995 28423 - Ribosomal_L11 | Ribosomal_L11_N
pfam k141_2683 k141_2683_18 28596 29312 - PNP_UDP_1
TC k141_2683 k141_2683_19 29382 30635 - 2.A.41.2.11
pfam k141_2683 k141_2683_20 30737 31525 - Radical_SAM | Fer4_12
pfam k141_2683 k141_2683_21 31534 33078 - YjjI-like
TC k141_2683 k141_2683_22 33288 33956 + 2.A.115.2.7
CAZyme k141_2683 k141_2683_23 33900 34940 - GT9
Gene ID: k141_2683_13
Type: TC
Location: 16975 - 18297 (+)
Gene ID: k141_2683_14
Type: pfam
Location: 18496 - 22764 (-)
Gene ID: k141_2683_15
Type: pfam
Location: 22890 - 26918 (-)
Gene ID: k141_2683_16
Type: TC
Location: 27301 - 27990 (-)
Gene ID: k141_2683_17
Type: pfam
Location: 27995 - 28423 (-)
Gene ID: k141_2683_18
Type: pfam
Location: 28596 - 29312 (-)
Gene ID: k141_2683_19
Type: TC
Location: 29382 - 30635 (-)
Gene ID: k141_2683_20
Type: pfam
Location: 30737 - 31525 (-)
Gene ID: k141_2683_21
Type: pfam
Location: 31534 - 33078 (-)
Gene ID: k141_2683_22
Type: TC
Location: 33288 - 33956 (+)
Gene ID: k141_2683_23
Type: CAZyme
Location: 33900 - 34940 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2683_17 vegetarian > omnivore 1.94255 0.04112

🧭 Explore Read Mapping of CGC

← Back to Cluster List