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Cluster: CGMR069458_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3039 k141_3039_44 40476 42422 - 9.B.14.1.3
pfam k141_3039 k141_3039_45 42419 42940 - CcmE
pfam k141_3039 k141_3039_46 42937 43140 - CcmD
TC k141_3039 k141_3039_47 43182 43922 - 9.B.14.2.3
TC k141_3039 k141_3039_48 43983 44648 - 3.A.1.107.3
TC k141_3039 k141_3039_49 44653 45291 - 3.A.1.107.3
pfam k141_3039 k141_3039_50 45553 46206 + Sod_Fe_N | Sod_Fe_C
pfam k141_3039 k141_3039_51 46251 47006 - UPF0020 | Ubie_methyltran | CMAS | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme k141_3039 k141_3039_52 47138 48283 - CE9
Gene ID: k141_3039_44
Type: TC
Location: 40476 - 42422 (-)
Gene ID: k141_3039_45
Type: pfam
Location: 42419 - 42940 (-)
Gene ID: k141_3039_46
Type: pfam
Location: 42937 - 43140 (-)
Gene ID: k141_3039_47
Type: TC
Location: 43182 - 43922 (-)
Gene ID: k141_3039_48
Type: TC
Location: 43983 - 44648 (-)
Gene ID: k141_3039_49
Type: TC
Location: 44653 - 45291 (-)
Gene ID: k141_3039_50
Type: pfam
Location: 45553 - 46206 (+)
Gene ID: k141_3039_51
Type: pfam
Location: 46251 - 47006 (-)
Gene ID: k141_3039_52
Type: CAZyme
Location: 47138 - 48283 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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