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Cluster: CGMR069270_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27442 k141_27442_148 159524 160201 + 2.A.89.3.2
TC k141_27442 k141_27442_149 160213 160929 + 2.A.89.3.2
pfam k141_27442 k141_27442_150 161016 161822 - Asp_Glu_race
pfam k141_27442 k141_27442_151 161948 162412 + tRNA_edit
TC k141_27442 k141_27442_152 162463 164463 - 2.A.36.3.2
TC k141_27442 k141_27442_153 164609 165832 + 2.A.1.2.20
peptidase k141_27442 k141_27442_154 166115 166864 + C40.UNW
NULL(UNKNOWN) k141_27442 k141_27442_155 166890 167174 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_27442 k141_27442_156 167223 168278 + GH25
Gene ID: k141_27442_148
Type: TC
Location: 159524 - 160201 (+)
Gene ID: k141_27442_149
Type: TC
Location: 160213 - 160929 (+)
Gene ID: k141_27442_150
Type: pfam
Location: 161016 - 161822 (-)
Gene ID: k141_27442_151
Type: pfam
Location: 161948 - 162412 (+)
Gene ID: k141_27442_152
Type: TC
Location: 162463 - 164463 (-)
Gene ID: k141_27442_153
Type: TC
Location: 164609 - 165832 (+)
Gene ID: k141_27442_154
Type: peptidase
Location: 166115 - 166864 (+)
Gene ID: k141_27442_155
Type:
Location: 166890 - 167174 (+)
Gene ID: k141_27442_156
Type: CAZyme
Location: 167223 - 168278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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