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Cluster: CGMR069270_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_98473 k141_98473_106 93498 94853 - 2.A.8.1.1
pfam k141_98473 k141_98473_107 94909 96459 - FGGY_N | FGGY_C
TF k141_98473 k141_98473_108 96701 97546 + HTH_6
CAZyme k141_98473 k141_98473_109 97567 98337 + GH25
pfam k141_98473 k141_98473_110 98330 98683 - DUF4828
pfam k141_98473 k141_98473_111 98811 99812 + GFO_IDH_MocA | GFO_IDH_MocA_C
TC k141_98473 k141_98473_112 99825 101144 + 1.I.1.1.3
pfam k141_98473 k141_98473_113 101598 102038 + Nuc_deoxyrib_tr | Nuc_deoxyri_tr2
TC k141_98473 k141_98473_114 102086 103489 + 2.A.39.1.5
pfam k141_98473 k141_98473_115 103673 104092 - GtrA_DPMS_TM
CAZyme k141_98473 k141_98473_116 104097 105038 - GT2
peptidase k141_98473 k141_98473_117 105056 106285 - M29.UPW
pfam k141_98473 k141_98473_118 106427 107551 + Epimerase_2
TC k141_98473 k141_98473_119 107551 108465 + 9.B.126.2.5
Gene ID: k141_98473_106
Type: TC
Location: 93498 - 94853 (-)
Gene ID: k141_98473_107
Type: pfam
Location: 94909 - 96459 (-)
Gene ID: k141_98473_108
Type: TF
Location: 96701 - 97546 (+)
Gene ID: k141_98473_109
Type: CAZyme
Location: 97567 - 98337 (+)
Gene ID: k141_98473_110
Type: pfam
Location: 98330 - 98683 (-)
Gene ID: k141_98473_111
Type: pfam
Location: 98811 - 99812 (+)
Gene ID: k141_98473_112
Type: TC
Location: 99825 - 101144 (+)
Gene ID: k141_98473_113
Type: pfam
Location: 101598 - 102038 (+)
Gene ID: k141_98473_114
Type: TC
Location: 102086 - 103489 (+)
Gene ID: k141_98473_115
Type: pfam
Location: 103673 - 104092 (-)
Gene ID: k141_98473_116
Type: CAZyme
Location: 104097 - 105038 (-)
Gene ID: k141_98473_117
Type: peptidase
Location: 105056 - 106285 (-)
Gene ID: k141_98473_118
Type: pfam
Location: 106427 - 107551 (+)
Gene ID: k141_98473_119
Type: TC
Location: 107551 - 108465 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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