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Cluster: CGMR069190_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_216816 k141_216816_31 38123 39946 - PL33_1
TF k141_216816 k141_216816_32 39962 41566 - HTH_AraC | HTH_AraC
TC k141_216816 k141_216816_33 41560 43365 - 8.A.59.2.1
STP k141_216816 k141_216816_34 43726 45096 + SBP_bac_1
TC k141_216816 k141_216816_35 45194 46291 + 3.A.1.1.20
TC k141_216816 k141_216816_36 46316 47155 + 3.A.1.1.11
CAZyme k141_216816 k141_216816_37 47189 48361 + GH88
CAZyme k141_216816 k141_216816_38 48398 50407 + PL12_1
NULL(UNKNOWN) k141_216816 k141_216816_39 50401 50655 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_216816 k141_216816_40 50776 51261 + HD
TC k141_216816 k141_216816_41 51350 52582 + 2.A.36.6.4
CAZyme k141_216816 k141_216816_42 52667 54016 + AA7
CAZyme k141_216816 k141_216816_43 54489 56048 + CBM54
CAZyme k141_216816 k141_216816_44 56146 57648 + CBM54 | SLH
TC k141_216816 k141_216816_45 57679 59556 + 9.B.18.2.1
STP k141_216816 k141_216816_46 59726 60937 + Aminotran_1_2
TC k141_216816 k141_216816_47 60930 61664 + 9.B.18.1.3
CAZyme k141_216816 k141_216816_48 62169 63146 + GT2
CAZyme k141_216816 k141_216816_49 63197 64279 + GT4
NULL(UNKNOWN) k141_216816 k141_216816_50 64254 65669 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_216816 k141_216816_51 65675 66421 + GT32
TC k141_216816 k141_216816_52 66423 67658 + 2.A.66.2.10
Gene ID: k141_216816_31
Type: CAZyme
Location: 38123 - 39946 (-)
Gene ID: k141_216816_32
Type: TF
Location: 39962 - 41566 (-)
Gene ID: k141_216816_33
Type: TC
Location: 41560 - 43365 (-)
Gene ID: k141_216816_34
Type: STP
Location: 43726 - 45096 (+)
Gene ID: k141_216816_35
Type: TC
Location: 45194 - 46291 (+)
Gene ID: k141_216816_36
Type: TC
Location: 46316 - 47155 (+)
Gene ID: k141_216816_37
Type: CAZyme
Location: 47189 - 48361 (+)
Gene ID: k141_216816_38
Type: CAZyme
Location: 48398 - 50407 (+)
Gene ID: k141_216816_39
Type:
Location: 50401 - 50655 (+)
Gene ID: k141_216816_40
Type: STP
Location: 50776 - 51261 (+)
Gene ID: k141_216816_41
Type: TC
Location: 51350 - 52582 (+)
Gene ID: k141_216816_42
Type: CAZyme
Location: 52667 - 54016 (+)
Gene ID: k141_216816_43
Type: CAZyme
Location: 54489 - 56048 (+)
Gene ID: k141_216816_44
Type: CAZyme
Location: 56146 - 57648 (+)
Gene ID: k141_216816_45
Type: TC
Location: 57679 - 59556 (+)
Gene ID: k141_216816_46
Type: STP
Location: 59726 - 60937 (+)
Gene ID: k141_216816_47
Type: TC
Location: 60930 - 61664 (+)
Gene ID: k141_216816_48
Type: CAZyme
Location: 62169 - 63146 (+)
Gene ID: k141_216816_49
Type: CAZyme
Location: 63197 - 64279 (+)
Gene ID: k141_216816_50
Type:
Location: 64254 - 65669 (+)
Gene ID: k141_216816_51
Type: CAZyme
Location: 65675 - 66421 (+)
Gene ID: k141_216816_52
Type: TC
Location: 66423 - 67658 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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