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Cluster: CGMR069190_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_95715 k141_95715_38 39425 42202 + 4.C.1.1.4
TF k141_95715 k141_95715_39 42211 43170 - HTH_AraC | HTH_AraC
TC k141_95715 k141_95715_40 43519 44496 + 3.A.1.1.29
TC k141_95715 k141_95715_41 44508 45434 + 3.A.1.1.29
NULL(UNKNOWN) k141_95715 k141_95715_42 45500 47209 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_95715 k141_95715_43 47460 47651 + Alpha_L_fucos
CAZyme k141_95715 k141_95715_44 47972 48841 + GH29
NULL(UNKNOWN) k141_95715 k141_95715_45 49042 49332 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_95715 k141_95715_46 49272 49958 + GH43_22
TC k141_95715 k141_95715_47 50137 51471 + 2.A.66.1.33
Gene ID: k141_95715_38
Type: TC
Location: 39425 - 42202 (+)
Gene ID: k141_95715_39
Type: TF
Location: 42211 - 43170 (-)
Gene ID: k141_95715_40
Type: TC
Location: 43519 - 44496 (+)
Gene ID: k141_95715_41
Type: TC
Location: 44508 - 45434 (+)
Gene ID: k141_95715_42
Type:
Location: 45500 - 47209 (+)
Gene ID: k141_95715_43
Type: pfam
Location: 47460 - 47651 (+)
Gene ID: k141_95715_44
Type: CAZyme
Location: 47972 - 48841 (+)
Gene ID: k141_95715_45
Type:
Location: 49042 - 49332 (+)
Gene ID: k141_95715_46
Type: CAZyme
Location: 49272 - 49958 (+)
Gene ID: k141_95715_47
Type: TC
Location: 50137 - 51471 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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