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Cluster: CGMR069136_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_177639 k141_177639_23 22851 23636 - 3.A.1.3.20
TC k141_177639 k141_177639_24 23659 24807 - 3.A.1.3.20
TC k141_177639 k141_177639_25 24817 25743 - 3.A.1.3.20
pfam k141_177639 k141_177639_26 25952 26845 - Aldose_epim
NULL(UNKNOWN) k141_177639 k141_177639_27 26925 27794 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_177639 k141_177639_28 28055 29284 + 2.A.1.2.25
CAZyme k141_177639 k141_177639_29 29528 30853 + GH4
TC k141_177639 k141_177639_30 30878 32458 + 4.A.1.1.14
TF k141_177639 k141_177639_31 32537 33337 + HTH_6
TC k141_177639 k141_177639_32 33530 35092 - 4.A.1.1.3
CAZyme k141_177639 k141_177639_33 35174 36499 - GH4
Gene ID: k141_177639_23
Type: TC
Location: 22851 - 23636 (-)
Gene ID: k141_177639_24
Type: TC
Location: 23659 - 24807 (-)
Gene ID: k141_177639_25
Type: TC
Location: 24817 - 25743 (-)
Gene ID: k141_177639_26
Type: pfam
Location: 25952 - 26845 (-)
Gene ID: k141_177639_27
Type:
Location: 26925 - 27794 (-)
Gene ID: k141_177639_28
Type: TC
Location: 28055 - 29284 (+)
Gene ID: k141_177639_29
Type: CAZyme
Location: 29528 - 30853 (+)
Gene ID: k141_177639_30
Type: TC
Location: 30878 - 32458 (+)
Gene ID: k141_177639_31
Type: TF
Location: 32537 - 33337 (+)
Gene ID: k141_177639_32
Type: TC
Location: 33530 - 35092 (-)
Gene ID: k141_177639_33
Type: CAZyme
Location: 35174 - 36499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_177639_23 vegetarian > vegan 1.01552 0.00290

🧭 Explore Read Mapping of CGC

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