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Cluster: CGMR068902_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_105060 k141_105060_9 9938 11056 - 2.A.45.2.6
NULL(UNKNOWN) k141_105060 k141_105060_10 11398 13128 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_105060 k141_105060_11 13340 14608 - CBM6 | GH43_2
CAZyme k141_105060 k141_105060_12 14605 16710 - GH164
pfam k141_105060 k141_105060_13 16748 17872 - GLMA_2nd
CAZyme k141_105060 k141_105060_14 17933 18868 - GH35
TF k141_105060 k141_105060_15 18905 19303 - HTH_AraC | HTH_AraC
STP k141_105060 k141_105060_16 19300 20481 - Response_reg
TC k141_105060 k141_105060_17 20512 22179 - 9.B.33.1.1
NULL(UNKNOWN) k141_105060 k141_105060_18 22176 22466 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_105060 k141_105060_19 22996 23166 - FeoB_associated
TC k141_105060 k141_105060_20 23163 25226 - 9.A.8.1.10
Gene ID: k141_105060_9
Type: TC
Location: 9938 - 11056 (-)
Gene ID: k141_105060_10
Type:
Location: 11398 - 13128 (+)
Gene ID: k141_105060_11
Type: CAZyme
Location: 13340 - 14608 (-)
Gene ID: k141_105060_12
Type: CAZyme
Location: 14605 - 16710 (-)
Gene ID: k141_105060_13
Type: pfam
Location: 16748 - 17872 (-)
Gene ID: k141_105060_14
Type: CAZyme
Location: 17933 - 18868 (-)
Gene ID: k141_105060_15
Type: TF
Location: 18905 - 19303 (-)
Gene ID: k141_105060_16
Type: STP
Location: 19300 - 20481 (-)
Gene ID: k141_105060_17
Type: TC
Location: 20512 - 22179 (-)
Gene ID: k141_105060_18
Type:
Location: 22176 - 22466 (-)
Gene ID: k141_105060_19
Type: pfam
Location: 22996 - 23166 (-)
Gene ID: k141_105060_20
Type: TC
Location: 23163 - 25226 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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