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Cluster: CGMR068902_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_62874 k141_62874_2 875 2287 + 2.A.25.1.4
CAZyme k141_62874 k141_62874_3 2432 3739 + GH5_13
TC k141_62874 k141_62874_4 4541 5950 + 2.A.66.1.33
TC k141_62874 k141_62874_5 6020 7372 - 2.A.40.1.2
TC k141_62874 k141_62874_6 7721 9316 - 3.A.1.147.6
TC k141_62874 k141_62874_7 9309 10022 - 3.A.1.147.6
pfam k141_62874 k141_62874_8 10148 10867 - DUF1648 | SdpI
TF k141_62874 k141_62874_9 10821 11138 - HTH_5
TC k141_62874 k141_62874_10 11489 12868 + 4.A.1.2.1
TF k141_62874 k141_62874_11 12933 13919 + LacI
CAZyme k141_62874 k141_62874_12 13993 15441 + GH32
Gene ID: k141_62874_2
Type: TC
Location: 875 - 2287 (+)
Gene ID: k141_62874_3
Type: CAZyme
Location: 2432 - 3739 (+)
Gene ID: k141_62874_4
Type: TC
Location: 4541 - 5950 (+)
Gene ID: k141_62874_5
Type: TC
Location: 6020 - 7372 (-)
Gene ID: k141_62874_6
Type: TC
Location: 7721 - 9316 (-)
Gene ID: k141_62874_7
Type: TC
Location: 9309 - 10022 (-)
Gene ID: k141_62874_8
Type: pfam
Location: 10148 - 10867 (-)
Gene ID: k141_62874_9
Type: TF
Location: 10821 - 11138 (-)
Gene ID: k141_62874_10
Type: TC
Location: 11489 - 12868 (+)
Gene ID: k141_62874_11
Type: TF
Location: 12933 - 13919 (+)
Gene ID: k141_62874_12
Type: CAZyme
Location: 13993 - 15441 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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