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Cluster: CGMR068902_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_68410 k141_68410_11 8693 9406 - 3.A.1.122.2
pfam k141_68410 k141_68410_12 9643 11172 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme k141_68410 k141_68410_13 11319 12848 - GH39
CAZyme k141_68410 k141_68410_14 12867 13262 - GH10
CAZyme k141_68410 k141_68410_15 13283 13900 - GH10
CAZyme k141_68410 k141_68410_16 14146 15264 + GH8
TC k141_68410 k141_68410_17 15426 16445 - 9.A.11.1.1
TC k141_68410 k141_68410_18 16521 17048 - 9.A.11.1.1
peptidase k141_68410 k141_68410_19 17349 18662 - M20.UPW
pfam k141_68410 k141_68410_20 18937 19476 - Ferritin | Rubrerythrin | RUBY_RBDX
CAZyme k141_68410 k141_68410_21 19796 21265 + GH51_1
Gene ID: k141_68410_11
Type: TC
Location: 8693 - 9406 (-)
Gene ID: k141_68410_12
Type: pfam
Location: 9643 - 11172 (+)
Gene ID: k141_68410_13
Type: CAZyme
Location: 11319 - 12848 (-)
Gene ID: k141_68410_14
Type: CAZyme
Location: 12867 - 13262 (-)
Gene ID: k141_68410_15
Type: CAZyme
Location: 13283 - 13900 (-)
Gene ID: k141_68410_16
Type: CAZyme
Location: 14146 - 15264 (+)
Gene ID: k141_68410_17
Type: TC
Location: 15426 - 16445 (-)
Gene ID: k141_68410_18
Type: TC
Location: 16521 - 17048 (-)
Gene ID: k141_68410_19
Type: peptidase
Location: 17349 - 18662 (-)
Gene ID: k141_68410_20
Type: pfam
Location: 18937 - 19476 (-)
Gene ID: k141_68410_21
Type: CAZyme
Location: 19796 - 21265 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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