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Cluster: CGMR068902_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_97265 k141_97265_14 15849 16781 + 3.A.1.7.5
TC k141_97265 k141_97265_15 16778 17752 + 3.A.1.7.5
TC k141_97265 k141_97265_16 17769 18536 + 3.A.1.7.5
pfam k141_97265 k141_97265_17 18536 19210 + PhoU | PhoU
TF k141_97265 k141_97265_18 19345 20136 + Trans_reg_C
TC k141_97265 k141_97265_19 20133 21830 + 2.A.21.9.2
NULL(UNKNOWN) k141_97265 k141_97265_20 22149 22679 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_97265 k141_97265_21 22960 23307 + HTH_3
TC k141_97265 k141_97265_22 23553 25055 + 2.A.66.1.22
CAZyme k141_97265 k141_97265_23 25266 26255 + GH43_26
Gene ID: k141_97265_14
Type: TC
Location: 15849 - 16781 (+)
Gene ID: k141_97265_15
Type: TC
Location: 16778 - 17752 (+)
Gene ID: k141_97265_16
Type: TC
Location: 17769 - 18536 (+)
Gene ID: k141_97265_17
Type: pfam
Location: 18536 - 19210 (+)
Gene ID: k141_97265_18
Type: TF
Location: 19345 - 20136 (+)
Gene ID: k141_97265_19
Type: TC
Location: 20133 - 21830 (+)
Gene ID: k141_97265_20
Type:
Location: 22149 - 22679 (+)
Gene ID: k141_97265_21
Type: TF
Location: 22960 - 23307 (+)
Gene ID: k141_97265_22
Type: TC
Location: 23553 - 25055 (+)
Gene ID: k141_97265_23
Type: CAZyme
Location: 25266 - 26255 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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