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Cluster: CGMR068902_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_56427 k141_56427_12 10245 11156 + GH43_33
NULL(UNKNOWN) k141_56427 k141_56427_13 11338 11583 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_56427 k141_56427_14 11770 13509 - 3.A.1.106.2
TC k141_56427 k141_56427_15 13534 14049 - 1.I.1.1.3
TF k141_56427 k141_56427_16 14250 14507 - HTH_3
TF k141_56427 k141_56427_17 14631 15002 + HTH_3
CAZyme k141_56427 k141_56427_18 15040 17316 - GH2
pfam k141_56427 k141_56427_19 17691 18446 + Exo_endo_phos
TF k141_56427 k141_56427_20 18591 19475 - HTH_AraC
CAZyme k141_56427 k141_56427_21 19822 21642 + GH63
CAZyme k141_56427 k141_56427_22 21955 25050 + GH38
pfam k141_56427 k141_56427_23 25063 25524 + LuxS
TC k141_56427 k141_56427_24 25688 27022 + 2.A.35.1.5
Gene ID: k141_56427_12
Type: CAZyme
Location: 10245 - 11156 (+)
Gene ID: k141_56427_13
Type:
Location: 11338 - 11583 (+)
Gene ID: k141_56427_14
Type: TC
Location: 11770 - 13509 (-)
Gene ID: k141_56427_15
Type: TC
Location: 13534 - 14049 (-)
Gene ID: k141_56427_16
Type: TF
Location: 14250 - 14507 (-)
Gene ID: k141_56427_17
Type: TF
Location: 14631 - 15002 (+)
Gene ID: k141_56427_18
Type: CAZyme
Location: 15040 - 17316 (-)
Gene ID: k141_56427_19
Type: pfam
Location: 17691 - 18446 (+)
Gene ID: k141_56427_20
Type: TF
Location: 18591 - 19475 (-)
Gene ID: k141_56427_21
Type: CAZyme
Location: 19822 - 21642 (+)
Gene ID: k141_56427_22
Type: CAZyme
Location: 21955 - 25050 (+)
Gene ID: k141_56427_23
Type: pfam
Location: 25063 - 25524 (+)
Gene ID: k141_56427_24
Type: TC
Location: 25688 - 27022 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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