Cluster: CGMR068460_CGC5
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR068460
- CGC Family ID: CGCFAM_00518
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14597 | k141_14597_36 | 35398 | 36951 | - | 3.A.1.5.20 |
| TC | k141_14597 | k141_14597_37 | 37270 | 38085 | - | 3.A.1.5.12 |
| TC | k141_14597 | k141_14597_38 | 38078 | 38875 | - | 3.A.1.5.25 |
| TC | k141_14597 | k141_14597_39 | 38888 | 40453 | - | 3.A.1.5.3 |
| TC | k141_14597 | k141_14597_40 | 40607 | 41428 | - | 3.A.1.5.38 |
| TC | k141_14597 | k141_14597_41 | 41428 | 42366 | - | 3.A.1.5.11 |
| TC | k141_14597 | k141_14597_42 | 43206 | 44537 | - | 2.A.3.2.1 |
| pfam | k141_14597 | k141_14597_43 | 45154 | 46581 | - | Lyase_1 | ASL_C2 |
| pfam | k141_14597 | k141_14597_44 | 46581 | 47792 | - | Arginosuc_synth | Arginosuc_syn_C |
| CAZyme | k141_14597 | k141_14597_45 | 48055 | 48861 | - | GT51 |
| pfam | k141_14597 | k141_14597_46 | 49191 | 49469 | + | Trns_repr_metal |
| TC | k141_14597 | k141_14597_47 | 49690 | 49950 | - | 8.A.8.1.1 |
| TC | k141_14597 | k141_14597_48 | 50100 | 51827 | - | 8.A.7.1.1 |
| pfam | k141_14597 | k141_14597_49 | 52137 | 52970 | + | DAP_epimerase | DAP_epimerase | Pro_racemase |
| TC | k141_14597 | k141_14597_50 | 53032 | 54354 | + | 2.A.35.1.2 |
Gene ID: k141_14597_36
Type: TC
Location: 35398 - 36951 (-)
Type: TC
Location: 35398 - 36951 (-)
Gene ID: k141_14597_37
Type: TC
Location: 37270 - 38085 (-)
Type: TC
Location: 37270 - 38085 (-)
Gene ID: k141_14597_38
Type: TC
Location: 38078 - 38875 (-)
Type: TC
Location: 38078 - 38875 (-)
Gene ID: k141_14597_39
Type: TC
Location: 38888 - 40453 (-)
Type: TC
Location: 38888 - 40453 (-)
Gene ID: k141_14597_40
Type: TC
Location: 40607 - 41428 (-)
Type: TC
Location: 40607 - 41428 (-)
Gene ID: k141_14597_41
Type: TC
Location: 41428 - 42366 (-)
Type: TC
Location: 41428 - 42366 (-)
Gene ID: k141_14597_42
Type: TC
Location: 43206 - 44537 (-)
Type: TC
Location: 43206 - 44537 (-)
Gene ID: k141_14597_43
Type: pfam
Location: 45154 - 46581 (-)
Type: pfam
Location: 45154 - 46581 (-)
Gene ID: k141_14597_44
Type: pfam
Location: 46581 - 47792 (-)
Type: pfam
Location: 46581 - 47792 (-)
Gene ID: k141_14597_45
Type: CAZyme
Location: 48055 - 48861 (-)
Type: CAZyme
Location: 48055 - 48861 (-)
Gene ID: k141_14597_46
Type: pfam
Location: 49191 - 49469 (+)
Type: pfam
Location: 49191 - 49469 (+)
Gene ID: k141_14597_47
Type: TC
Location: 49690 - 49950 (-)
Type: TC
Location: 49690 - 49950 (-)
Gene ID: k141_14597_48
Type: TC
Location: 50100 - 51827 (-)
Type: TC
Location: 50100 - 51827 (-)
Gene ID: k141_14597_49
Type: pfam
Location: 52137 - 52970 (+)
Type: pfam
Location: 52137 - 52970 (+)
Gene ID: k141_14597_50
Type: TC
Location: 53032 - 54354 (+)
Type: TC
Location: 53032 - 54354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella infantium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.