Cluster: CGMR068460_CGC2
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR068460
- CGC Family ID: CGCFAM_00394
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_9275 | k141_9275_51 | 57018 | 57635 | - | 1.A.30.2.9 |
| TC | k141_9275 | k141_9275_52 | 57671 | 62740 | - | 1.B.14.1.4 |
| TF | k141_9275 | k141_9275_53 | 63012 | 64004 | - | HTH_AraC |
| pfam | k141_9275 | k141_9275_54 | 64115 | 64510 | - | DUF454 |
| TC | k141_9275 | k141_9275_55 | 64510 | 65877 | - | 4.A.7.1.4 |
| TC | k141_9275 | k141_9275_56 | 65909 | 66184 | - | 4.A.7.1.2 |
| TC | k141_9275 | k141_9275_57 | 66197 | 66661 | - | 4.A.7.1.1 |
| TC | k141_9275 | k141_9275_58 | 67021 | 68028 | + | 3.A.1.14.1 |
| TC | k141_9275 | k141_9275_59 | 68055 | 68801 | + | 3.A.1.14.8 |
| STP | k141_9275 | k141_9275_60 | 68821 | 69825 | + | Peripla_BP_2 |
| NULL(UNKNOWN) | k141_9275 | k141_9275_61 | 70061 | 70234 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_9275 | k141_9275_62 | 70649 | 71647 | - | 2.A.20.1.5 |
| pfam | k141_9275 | k141_9275_63 | 71640 | 72269 | - | PhoU_div |
| STP | k141_9275 | k141_9275_64 | 72676 | 74145 | - | Fer4 |
| TC | k141_9275 | k141_9275_65 | 74278 | 76284 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | k141_9275 | k141_9275_66 | 76397 | 76717 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_9275 | k141_9275_67 | 76847 | 78010 | - | GT28 |
| pfam | k141_9275 | k141_9275_68 | 78093 | 78392 | - | Bac_DNA_binding | HU-HIG |
| pfam | k141_9275 | k141_9275_69 | 78444 | 79226 | - | PRA-PH | MazG | MazG |
| TC | k141_9275 | k141_9275_70 | 79210 | 80817 | - | 2.A.66.2.14 |
Gene ID: k141_9275_51
Type: TC
Location: 57018 - 57635 (-)
Type: TC
Location: 57018 - 57635 (-)
Gene ID: k141_9275_52
Type: TC
Location: 57671 - 62740 (-)
Type: TC
Location: 57671 - 62740 (-)
Gene ID: k141_9275_53
Type: TF
Location: 63012 - 64004 (-)
Type: TF
Location: 63012 - 64004 (-)
Gene ID: k141_9275_54
Type: pfam
Location: 64115 - 64510 (-)
Type: pfam
Location: 64115 - 64510 (-)
Gene ID: k141_9275_55
Type: TC
Location: 64510 - 65877 (-)
Type: TC
Location: 64510 - 65877 (-)
Gene ID: k141_9275_56
Type: TC
Location: 65909 - 66184 (-)
Type: TC
Location: 65909 - 66184 (-)
Gene ID: k141_9275_57
Type: TC
Location: 66197 - 66661 (-)
Type: TC
Location: 66197 - 66661 (-)
Gene ID: k141_9275_58
Type: TC
Location: 67021 - 68028 (+)
Type: TC
Location: 67021 - 68028 (+)
Gene ID: k141_9275_59
Type: TC
Location: 68055 - 68801 (+)
Type: TC
Location: 68055 - 68801 (+)
Gene ID: k141_9275_60
Type: STP
Location: 68821 - 69825 (+)
Type: STP
Location: 68821 - 69825 (+)
Gene ID: k141_9275_61
Type:
Location: 70061 - 70234 (-)
Type:
Location: 70061 - 70234 (-)
Gene ID: k141_9275_62
Type: TC
Location: 70649 - 71647 (-)
Type: TC
Location: 70649 - 71647 (-)
Gene ID: k141_9275_63
Type: pfam
Location: 71640 - 72269 (-)
Type: pfam
Location: 71640 - 72269 (-)
Gene ID: k141_9275_64
Type: STP
Location: 72676 - 74145 (-)
Type: STP
Location: 72676 - 74145 (-)
Gene ID: k141_9275_65
Type: TC
Location: 74278 - 76284 (-)
Type: TC
Location: 74278 - 76284 (-)
Gene ID: k141_9275_66
Type:
Location: 76397 - 76717 (+)
Type:
Location: 76397 - 76717 (+)
Gene ID: k141_9275_67
Type: CAZyme
Location: 76847 - 78010 (-)
Type: CAZyme
Location: 76847 - 78010 (-)
Gene ID: k141_9275_68
Type: pfam
Location: 78093 - 78392 (-)
Type: pfam
Location: 78093 - 78392 (-)
Gene ID: k141_9275_69
Type: pfam
Location: 78444 - 79226 (-)
Type: pfam
Location: 78444 - 79226 (-)
Gene ID: k141_9275_70
Type: TC
Location: 79210 - 80817 (-)
Type: TC
Location: 79210 - 80817 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella infantium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.