Cluster: CGMR067593_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56100 | k141_56100_15 | 12325 | 13662 | - | 2.A.12.1.18 |
| CAZyme | k141_56100 | k141_56100_16 | 13782 | 15368 | + | AA3_2 |
| pfam | k141_56100 | k141_56100_17 | 15396 | 19451 | - | DEAD | Helicase_C | HA2_N | OB_NTP_bind | DUF3418 | HA2_C |
| TC | k141_56100 | k141_56100_18 | 19544 | 21376 | + | 2.A.16.2.2 |
Gene ID: k141_56100_15
Type: TC
Location: 12325 - 13662 (-)
Type: TC
Location: 12325 - 13662 (-)
Gene ID: k141_56100_16
Type: CAZyme
Location: 13782 - 15368 (+)
Type: CAZyme
Location: 13782 - 15368 (+)
Gene ID: k141_56100_17
Type: pfam
Location: 15396 - 19451 (-)
Type: pfam
Location: 15396 - 19451 (-)
Gene ID: k141_56100_18
Type: TC
Location: 19544 - 21376 (+)
Type: TC
Location: 19544 - 21376 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.