Cluster: CGMR067593_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- CGC Family ID: CGCFAM_03747
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_80100 | k141_80100_179 | 179500 | 180678 | + | CBM50 |
| TC | k141_80100 | k141_80100_180 | 180706 | 181899 | + | 3.A.11.1.3 |
| pfam | k141_80100 | k141_80100_181 | 181954 | 182445 | + | DUF494 |
| NULL(UNKNOWN) | k141_80100 | k141_80100_182 | 182683 | 183231 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_80100 | k141_80100_183 | 183228 | 184133 | + | 1.E.43.3.1 |
| TC | k141_80100 | k141_80100_184 | 184263 | 186875 | + | 3.A.7.7.1 |
Gene ID: k141_80100_179
Type: CAZyme
Location: 179500 - 180678 (+)
Type: CAZyme
Location: 179500 - 180678 (+)
Gene ID: k141_80100_180
Type: TC
Location: 180706 - 181899 (+)
Type: TC
Location: 180706 - 181899 (+)
Gene ID: k141_80100_181
Type: pfam
Location: 181954 - 182445 (+)
Type: pfam
Location: 181954 - 182445 (+)
Gene ID: k141_80100_182
Type:
Location: 182683 - 183231 (+)
Type:
Location: 182683 - 183231 (+)
Gene ID: k141_80100_183
Type: TC
Location: 183228 - 184133 (+)
Type: TC
Location: 183228 - 184133 (+)
Gene ID: k141_80100_184
Type: TC
Location: 184263 - 186875 (+)
Type: TC
Location: 184263 - 186875 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.