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Cluster: CGMR067593_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_80100 k141_80100_40 39938 40846 - GT2
TC k141_80100 k141_80100_41 40956 42665 - 3.A.6.1.1
pfam k141_80100 k141_80100_42 42894 43220 - Thioredoxin | AhpC-TSA | Thioredoxin_2 | Thioredoxin_8
TC k141_80100 k141_80100_43 43413 45134 + 1.I.1.1.3
TC k141_80100 k141_80100_44 45178 45867 + 3.A.1.140.1
TC k141_80100 k141_80100_45 45860 46882 + 3.A.1.140.1
STP k141_80100 k141_80100_46 46886 47764 + Response_reg | Response_reg
pfam k141_80100 k141_80100_47 47778 48494 + UDG
TC k141_80100 k141_80100_48 48650 49216 + 1.B.1.12.1
Gene ID: k141_80100_40
Type: CAZyme
Location: 39938 - 40846 (-)
Gene ID: k141_80100_41
Type: TC
Location: 40956 - 42665 (-)
Gene ID: k141_80100_42
Type: pfam
Location: 42894 - 43220 (-)
Gene ID: k141_80100_43
Type: TC
Location: 43413 - 45134 (+)
Gene ID: k141_80100_44
Type: TC
Location: 45178 - 45867 (+)
Gene ID: k141_80100_45
Type: TC
Location: 45860 - 46882 (+)
Gene ID: k141_80100_46
Type: STP
Location: 46886 - 47764 (+)
Gene ID: k141_80100_47
Type: pfam
Location: 47778 - 48494 (+)
Gene ID: k141_80100_48
Type: TC
Location: 48650 - 49216 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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