Cluster: CGMR067593_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR067593
- CGC Family ID: CGCFAM_01409
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_151059 | k141_151059_3 | 1262 | 2971 | - | 3.A.7.1.1 |
| pfam | k141_151059 | k141_151059_4 | 3068 | 3658 | - | RNase_HII |
| CAZyme | k141_151059 | k141_151059_5 | 3655 | 4845 | - | GT19 |
Gene ID: k141_151059_3
Type: TC
Location: 1262 - 2971 (-)
Type: TC
Location: 1262 - 2971 (-)
Gene ID: k141_151059_4
Type: pfam
Location: 3068 - 3658 (-)
Type: pfam
Location: 3068 - 3658 (-)
Gene ID: k141_151059_5
Type: CAZyme
Location: 3655 - 4845 (-)
Type: CAZyme
Location: 3655 - 4845 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Pseudoxanthomonas_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.