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Cluster: CGMR067593_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_157879 k141_157879_53 56289 57206 + 3.A.7.2.1
pfam k141_157879 k141_157879_54 57203 57952 + CagX
TC k141_157879 k141_157879_55 57949 59169 + 3.A.7.3.1
TC k141_157879 k141_157879_56 59183 60235 + 3.A.7.3.1
CAZyme k141_157879 k141_157879_57 60330 61139 + GH23
pfam k141_157879 k141_157879_58 61216 61605 + TrbC
TC k141_157879 k141_157879_59 61598 61909 + 3.A.7.3.1
TC k141_157879 k141_157879_60 61906 63879 + 3.A.7.2.1
Gene ID: k141_157879_53
Type: TC
Location: 56289 - 57206 (+)
Gene ID: k141_157879_54
Type: pfam
Location: 57203 - 57952 (+)
Gene ID: k141_157879_55
Type: TC
Location: 57949 - 59169 (+)
Gene ID: k141_157879_56
Type: TC
Location: 59183 - 60235 (+)
Gene ID: k141_157879_57
Type: CAZyme
Location: 60330 - 61139 (+)
Gene ID: k141_157879_58
Type: pfam
Location: 61216 - 61605 (+)
Gene ID: k141_157879_59
Type: TC
Location: 61598 - 61909 (+)
Gene ID: k141_157879_60
Type: TC
Location: 61906 - 63879 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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